BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A12SP1|AL426147
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig524 1365 0.0
>3x_Contig524
Length = 2067
Score = 1365 bits (688), Expect = 0.0
Identities = 698/702 (99%)
Strand = Plus / Plus
Query: 1 aatcggtgtataagttcggtatcataacgacctgtaggagatcgaatttttttctgaatg 60
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1366 aatcggtgtataagtacggtatcataacgtcctgtaggagatcgaatttttttctgaatg 1425
Query: 61 ggttccccatagaacttacctgtatgaaaagatttacaaatgaaagatcatcatcttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 ggttccccatagaacttacctgtatgaaaagatttacaaatgaaagatcatcatcttctt 1485
Query: 121 catcgccatgcaatttcataccagatgctctcaaacacgacttcaattgtgtcaaaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 catcgccatgcaatttcataccagatgctctcaaacacgacttcaattgtgtcaaaccac 1545
Query: 181 cgttatatggggttgagtacacaaattgacaattttgttcgtccaagacatgccatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 cgttatatggggttgagtacacaaattgacaattttgttcgtccaagacatgccatttgt 1605
Query: 241 accgctttaaagatgcaatcaaaccatataatgacgtatacgatgagtacgaattaaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 accgctttaaagatgcaatcaaaccatataatgacgtatacgatgagtacgaattaaggt 1665
Query: 301 actccaataattcgtcctcaaaccgggatttctttttcggtactgtttctgacttctcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1666 actccaataattcgtcctcaaaccgggatttctttttcggtactgtttctgacttctcgt 1725
Query: 361 ataacaggggtgaggtccatactgtctgctgaaccaagttcatctcttcacgagatagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1726 ataacaggggtgaggtccatactgtctgctgaaccaagttcatctcttcacgagatagat 1785
Query: 421 taaatgacggtacatgcattctcatcgtcccattttgatgaaacgagaaaataatcttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1786 taaatgacggtacatgcattctcatcgtcccattttgatgaaacgagaaaataatcttgg 1845
Query: 481 aatgatgacaaccccaaggcgagggaatatcaactcgatgcactttcaggtttgcataat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1846 aatgatgacaaccccaaggcgagggaatatcaactcgatgcactttcaggtttgcataat 1905
Query: 541 gcgatatcggttgttccgaattgattgtgttcaattgacccactatatgaactttaacgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1906 gcgatatcggttgttccgaattgattgtgttcaattgacccactatatgaactttaacgt 1965
Query: 601 gatctttgatcggggacatgataagattgatttgaaatccaaaggaaaataaccagactt 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1966 gatctttgatcggngacatgataagattgatttgaaatccaaaggaaaataaccagactt 2025
Query: 661 cattcaatgatgggtccgaaagtacatcattcaactcgaaca 702
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2026 cattcaatgatgggtccganagtacatcattcaactcgaaca 2067
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6290
Number of Sequences: 1807
Number of extensions: 6290
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)